#!/bin/bash
set -e

pkg="dialign"

if [ "$AUTOPKGTEST_TMP" = "" ] ; then
  AUTOPKGTEST_TMP=`mktemp -d /tmp/${pkg}-test.XXXXXX`
fi

cp -a /usr/share/doc/${pkg}/examples/* $AUTOPKGTEST_TMP

cd $AUTOPKGTEST_TMP

# General remark examples

/usr/bin/dialign2-2 -nt -n example.fa
cat example.ali

/usr/bin/dialign2-2 -n -nt example.fa
cat example.ali

echo "PASS"
